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  "Package": "phoenix",
  "Title": "The Phoenix Pediatric Sepsis and Septic Shock Criteria",
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  "Authors@R": "c(\nperson(given = \"Peter\", family = \"DeWitt\",  email = \"peter.dewitt@cuanschutz.edu\", role = c(\"aut\", \"cre\", \"cov\"), comment = c(ORCID = \"0000-0002-6391-0795\")),\nperson(given = \"Seth\",  family = \"Russell\", email = \"seth.russell@cuanschutz.edu\", role = c(\"ctb\"), comment = c(ORCID = \"0000-0002-2436-1367\")),\nperson(given = \"Meg\", family = \"Rebull\", email = \"meg.rebull@cuanschutz.edu\", role = c(\"ctb\"), comment = c(ORCID = \"0000-0003-0334-4223\")),\nperson(given = \"Tell\",  family = \"Bennett\", email = \"tell.bennett@cuanschutz.edu\", role = c(\"ctb\"), comment = c(ORCID = \"0000-0003-1483-4236\")),\nperson(given = \"L. Nelson\", family = \"Sanchez-Pinto\", email = \"lsanchezpinto@luriechildrens.org\", role = c(\"ctb\"), comment = c(ORCID = \"0000-0002-7434-6747\")),\nperson(given = \"Vincent\", family = \"Rubinetti\", email = \"vincent.rubinetti@cuanschutz.edu\", role = c(\"cov\"), comment = c(ORCID = \"0000-0002-4655-3773\"))\n)",
  "Description": "Implementation of the Phoenix and Phoenix-8 Sepsis\nCriteria as described in \"Development and Validation of the\nPhoenix Criteria for Pediatric Sepsis and Septic Shock\" by\nSanchez-Pinto, Bennett, DeWitt, Russell et al. (2024)\n<doi:10.1001/jama.2024.0196> (Drs. Sanchez-Pinto and Bennett\ncontributed equally to this manuscript; Dr. DeWitt and Mr.\nRussell contributed equally to the manuscript), \"International\nConsensus Criteria for Pediatric Sepsis and Septic Shock\" by\nSchlapbach, Watson, Sorce, Argent, et al. (2024)\n<doi:10.1001/jama.2024.0179> (Drs Schlapbach, Watson, Sorce,\nand Argent contributed equally) and the application note\n\"phoenix: an R package and Python module for calculating the\nPhoenix pediatric sepsis score and criteria\" by DeWitt,\nRussell, Rebull, Sanchez-Pinto, and Bennett (2024)\n<doi:10.1093/jamiaopen/ooae066>.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "URL": "https://cu-dbmi-peds.github.io/phoenix/,\nhttps://github.com/CU-DBMI-Peds/phoenix/",
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  "Repository": "https://cu-dbmi-peds.r-universe.dev",
  "Date/Publication": "2026-02-06 14:27:22 UTC",
  "RemoteUrl": "https://github.com/cu-dbmi-peds/phoenix",
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  "NeedsCompilation": "no",
  "Packaged": {
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    "User": "root"
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  "Author": "Peter DeWitt [aut, cre, cov] (ORCID:\n<https://orcid.org/0000-0002-6391-0795>),\nSeth Russell [ctb] (ORCID: <https://orcid.org/0000-0002-2436-1367>),\nMeg Rebull [ctb] (ORCID: <https://orcid.org/0000-0003-0334-4223>),\nTell Bennett [ctb] (ORCID: <https://orcid.org/0000-0003-1483-4236>),\nL. Nelson Sanchez-Pinto [ctb] (ORCID:\n<https://orcid.org/0000-0002-7434-6747>),\nVincent Rubinetti [cov] (ORCID:\n<https://orcid.org/0000-0002-4655-3773>)",
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        "age",
        "fio2",
        "pao2",
        "spo2",
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        "gcs_total",
        "pupil",
        "platelets",
        "inr",
        "d_dimer",
        "fibrinogen",
        "dbp",
        "sbp",
        "lactate",
        "dobutamine",
        "dopamine",
        "epinephrine",
        "milrinone",
        "norepinephrine",
        "vasopressin",
        "glucose",
        "anc",
        "alc",
        "creatinine",
        "bilirubin",
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